DAVID-EASE analysis on genes (326 genes) that are highly expressed at the 2T3 confluence status compared to the 2T3 low density.

System
Category
LH
LT
PH
PT
EASE Score
Fisher Exact
cellular_component intracellular
172
257
4649
9704
5.09E-10
3.59E-10
cellular_component nucleus
97
257
2212
9704
5.46E-08
3.21E-08
biological_process transcription
64
249
1335
9669
0.000000624
0.000000324
biological_process transcription, DNA-dependent
62
249
1287
9669
0.000000863
0.000000445
biological_process nucleobase, nucleoside, nucleotide and nucleic acid metabolism
81
249
1908
9669
0.00000157
0.000000927
biological_process regulation of transcription
61
249
1281
9669
0.00000163
0.000000851
biological_process regulation of transcription, DNA-dependent
60
249
1261
9669
0.00000212
0.00000111
biological_process metabolism
155
249
4632
9669
0.00000375
0.00000284
biological_process cell cycle
30
249
488
9669
0.0000197
0.00000781
molecular_function transcription regulator activity
43
270
894
10406
0.0000998
0.0000516
molecular_function protein binding
61
270
1463
10406
0.000142
0.0000851
biological_process cell proliferation
32
249
604
9669
0.000161
0.0000746
molecular_function DNA binding
57
270
1425
10406
0.000732
0.000458
biological_process physiological process
218
249
7738
9669
0.00118
0.00107
biological_process mitotic cell cycle
14
249
197
9669
0.00167
0.000561
biological_process skeletal development
8
249
68
9669
0.00172
0.000336
biological_process regulation of cell cycle
16
249
247
9669
0.00173
0.000642
cellular_component extracellular matrix
16
257
246
9704
0.00218
0.000826
cellular_component vacuole
9
257
88
9704
0.00219
0.000513
molecular_function binding
172
270
5769
10406
0.00375
0.00321
cellular_component cytoplasm
85
257
2475
9704
0.00483
0.00362
cellular_component lysosome
8
257
81
9704
0.00541
0.00131
cellular_component lytic vacuole
8
257
81
9704
0.00541
0.00131
biological_process gastrulation
4
249
15
9669
0.00604
0.000468
molecular_function transcription factor binding
8
270
88
10406
0.00763
0.00198
molecular_function protein kinase regulator activity
6
270
49
10406
0.00838
0.00158
molecular_function kinase regulator activity
6
270
51
10406
0.00991
0.00195
molecular_function cyclin-dependent protein kinase regulator activity
4
270
18
10406
0.0105
0.00102
molecular_function extracellular matrix structural constituent
6
270
54
10406
0.0125
0.00262
molecular_function protein serine/threonine kinase activity
19
270
391
10406
0.0129
0.00647
molecular_function glutathione transferase activity
4
270
21
10406
0.0161
0.00187
molecular_function transcription cofactor activity
7
270
79
10406
0.0163
0.00432
biological_process DNA replication and chromosome cycle
8
249
103
9669
0.0165
0.00501
biological_process embryonic development (sensu Animalia)
5
249
39
9669
0.0172
0.00306
molecular_function transcription factor activity
30
270
745
10406
0.0173
0.0106
biological_process DNA replication
7
249
84
9669
0.0206
0.0058
molecular_function protein kinase activity
20
270
444
10406
0.0216
0.0116
biological_process S phase of mitotic cell cycle
7
249
85
9669
0.0217
0.00619
cellular_component Golgi apparatus
14
257
263
9704
0.0219
0.0101
cellular_component cell
220
257
7821
9704
0.0227
0.0212
biological_process siderochrome transport
8
249
110
9669
0.0229
0.0074
biological_process vesicle-mediated transport
10
249
162
9669
0.0236
0.00906
molecular_function amino acid transporter activity
5
270
43
10406
0.0245
0.00487
molecular_function transferase activity, transferring alkyl or aryl (other than methyl) groups
5
270
44
10406
0.0264
0.00538
molecular_function ligand-dependent nuclear receptor activity
5
270
45
10406
0.0284
0.00593
biological_process cell growth and/or maintenance
84
249
2705
9669
0.0316
0.0254
molecular_function amine/polyamine transporter activity
5
270
47
10406
0.0327
0.00714
biological_process carboxylic acid transport
5
249
48
9669
0.0341
0.00756
biological_process organic acid transport
5
249
48
9669
0.0341
0.00756
molecular_function transferase activity
40
270
1125
10406
0.0343
0.0238
molecular_function transferase activity, transferring phosphorus-containing groups
25
270
627
10406
0.0345
0.021
molecular_function nucleic acid binding
66
270
2037
10406
0.035
0.027
cellular_component nucleoplasm
19
257
430
9704
0.0358
0.02
biological_process response to toxin
3
249
12
9669
0.0365
0.00312
biological_process mitosis
6
249
72
9669
0.0372
0.0104
biological_process M phase of mitotic cell cycle
6
249
73
9669
0.0391
0.0111
biological_process phosphate metabolism
22
249
543
9669
0.0392
0.0233
biological_process phosphorus metabolism
22
249
543
9669
0.0392
0.0233
biological_process nuclear division
7
249
98
9669
0.0399
0.0131
biological_process protein amino acid phosphorylation
18
249
421
9669
0.0432
0.0241
biological_process DNA metabolism
15
249
329
9669
0.0439
0.023
molecular_function carboxylic acid transporter activity
5
270
52
10406
0.0449
0.0109
biological_process development
42
249
1230
9669
0.0456
0.0327
molecular_function organic acid transporter activity
5
270
53
10406
0.0476
0.0118
biological_process organogenesis
26
249
687
9669
0.0477
0.0305
molecular_function oxidoreductase activity, acting on the aldehyde or oxo group of donors
4
270
32
10406
0.0488
0.009
molecular_function hydrolase activity, acting on glycosyl bonds
6
270
77
10406
0.0488
0.0147
molecular_function calcium-dependent phospholipid binding
3
270
14
10406
0.0494
0.00509
biological_process protein folding
6
249
78
9669
0.0496
0.0151